Notes
Slide Show
Outline
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The Application of the Immersed Boundary Method to Modeling Phonation*

Comer Duncan1, Guangnian Zhai1, and Ronald Scherer2

(1) Department of Physics and Astronomy,
(2) Department of Communication Disorders
Bowling Green State University, Bowling Green OH 43403
  • *work supported in part by NIH
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Immersed Boundary method for phonation-preliminary studies
  • Introduction and Motivation
  • The Immersed Boundary method
  • Initial Modeling of Simplified Models of Phonation
  • Preliminary Results of Some 2D Simulations
  • Developmental Issues
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Introduction and Motivation
  • Phonation involves coupled interaction and self-oscillation of vocal folds-air system
  • Many models to date treat
      • Material properties’ dynamics with an approximation to the aerodynamics
      • Aerodynamics with fixed or externally prescribed motions of the folds
      • Aerodynamics with material dynamics modeled using finite elements
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Introduction and Motivation (cont’d)
  • Goal of present studies:  Devise models of phonation in which vocal folds and the aerodynamics are treated as the closely coupled systems they are, exhibiting self-oscillation and physical volume flows
  • Present approach makes use of the Immersed Boundary (IB) method originally developed by Charles Peskin (Courant Institute) for the mammalian heart
  • Describe initial research into feasibility of using IB applied to models of phonation
  • Present some preliminary results & assess potential for elaboration and development of IB based models of phonation
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Example from Peskin-McQueen work on the heart
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The Immersed Boundary method: basic ideas
  • Equations summarizing the Immersed Boundary method:
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"Eulerian mesh with immersed boundary"
  • Eulerian mesh with immersed boundary
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Single Time Step in IB Method
  • Given Xni evaluate force Fni on boundary marker i due to other material points for all i=1, Nparticles  in material (Lagrangian).
  • Spread Fni  to Eulerian grid using Delta-function [for each layer if multiple layers]. Gives fn, the force on the fluid due to the boundary/material points.
  • Solve forced Navier-Stokes equations to update velocity field to time level n+1, thus giving un+1
  • at all Eulerian grid points.
  • Gather Eulerian velocity field values surrounding a given particle using Delta-function. Gives Un+1i .
  • Use No-Slip condition to push boundary points to new values, so Xn+1i  emerges.


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Force on particle spread to surrounding Eulerian mesh via delta-function
    • Delta-function weighted spread of force to some eulerian mesh points
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No-slip condition to obtain particle velocities from surrounding Eulerian mesh
    • Interpolate Eulerian velocities to particle
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Initial Modeling of Simplified Models of Phonation
  • 2D Model Feasibility Studies
  • Single layer model
  • Properties of folds’ materials lumped into force constants of the particles which make up the layer
  • Choose force constants which promote self-oscillation
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2D Model (cont’d)
  • Navier Stokes solver based on FFT and assumes periodic boundary conditions.
  • N-S solver used 256 x 512 Eulerian mesh
  • Used 5332 particles to model the 2D vocal folds with distance between particles = h/4
  • IB method computes velocity field, pressure field, and the motion of the model folds as one coupled system
  • Here as an illustration we render velocity field and vorticity and marker motion as (animated gif) movies
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Vx  Movie
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Vy  Movie
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Vorticity
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Markers and Model Folds Motion
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Volume Flow for 2D model
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Stengths and Weaknesses of IB method for Phonation
  • Strengths:
    • Air-Folds system treated as  intrinsically coupled system
    • Uses Eulerian cartesian mesh for NS and Lagrangian mesh for material
    • Easy to craft material properties—so modeling pathologies natural
    • 2D model shows promise as it exhibits many of the necessary properties
  • Weaknesses:
    • Currently for inompressible systems
    • Due to computational time constraints not yet doing air, only water—factor of 70 longer time needed for air—under development


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Conclusions
  • IB method has promise as a potentially viable tool for modeling phonation
  • 2D model exhibits self-oscillation and flow properties which indicate promise for the IB approach
  • Further developments underway
    • Further work on modeling folds material properties
    • Air as fluid simulations are began—considerable computational constraints on sequential code imply probable need to move to parallel IB method
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Developmental Issues
  • Add multiple layers in 2D, optimize material properties to obtain oscillations in physical ranges (already under development)
  • Single layer model in 3D
  • Multiple layer models in 3D
  • Parallel version of method in 2D (using MPI)
  • Develop compressible immersed boundary method
  • Coupling to model vocal tracts
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Example of Preliminary Multiple Layers System